BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A02LP1|AL425614
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig967 823 0.0
3x_Contig756 676 0.0
>3x_Contig967
Length = 3110
Score = 823 bits (414), Expect = 0.0
Identities = 418/420 (99%)
Strand = Plus / Minus
Query: 1 gatcttatcttctactcatctcgatgaagttgaccattgggatgcataaaatctttcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gatcttatcttctactcatctcgatgaagttgaccattgggatgcataaaatctttcaaa 373
Query: 61 agaaattctacatagcgctgtcacatttgcgggtaacagttaatatgtactgtcgatttt 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 372 agaaattctacatagcgctgtcacatttgcgggtaacagtaaatatgtactgtcgatttt 313
Query: 121 tgatataatgaaagtgacacaccgtaatcgctggtttaagactggagattcgacaagtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgatataatgaaagtgacacaccgtaatcgctggtttaagactggagattcgacaagtga 253
Query: 181 agatcacttgagggtactatgtattgtatgtwcttaaccccttcatttaacatagcgaat 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 252 agatcacttgagggtactatgtattgtatgtacttaaccccttcatttaacatagcgaat 193
Query: 241 tcaattttgaaaccttactgatataaattaccatttacacttttattcttttttgcaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tcaattttgaaaccttactgatataaattaccatttacacttttattcttttttgcaaga 133
Query: 301 gaaagtacattcacgtacaaaaatcataatagataacatagtcgcttacatcgttaccgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gaaagtacattcacgtacaaaaatcataatagataacatagtcgcttacatcgttaccgt 73
Query: 361 caattcttgcaaatatttttcagacgcgtacttatattaatgctttcactcttctaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 caattcttgcaaatatttttcagacgcgtacttatattaatgctttcactcttctaaaat 13
>3x_Contig756
Length = 1838
Score = 676 bits (340), Expect = 0.0
Identities = 352/356 (98%), Gaps = 1/356 (0%)
Strand = Plus / Minus
Query: 441 aacaaggtcaatgcttggtttttagttggatgtactctttcaacgtatattttcaacatt 500
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1831 aacaatgtcaatgcttggtttttagttggatgtactctttcaacgtatattttcaacatt 1772
Query: 501 acacaagatttgacacatcacattaaattcgaaaagtaaacaattcttaaaacactataa 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1771 acacaagatttgacacatcacattaaattcgaaaagtaaacaattcttaaaacactataa 1712
Query: 561 aatggaataagaactgaaaagtgtattgtacaaggcatgcmacttgctcagttaactcaa 620
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1711 aatggaataagaactgaaaagtgtattgtacaaggcatgcaacttgctcagttaactcaa 1652
Query: 621 aaggaataggcaatgttcatttggttgcacattccatactgaagtggacggtaacacact 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1651 aaggaataggcaatgttcatttggttgcacattccatactgaagtggacggtaacacact 1592
Query: 681 atgagtgaaaatgtgcaggttgttattcgtttacgaccggtacacacgaagacgaatttt 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1591 atgagtgaaaatgtgcaggttgttattcgtttacgaccggtacacacgaagacgaatttt 1532
Query: 741 aaggttcaaaatcaaactatatctactgtgg-amcaccactgaggtcattcaattt 795
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 1531 aaggttcaaaatcaaactatatctactgtggaaccaccactgaggtcattcaattt 1476
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6834
Number of Sequences: 1807
Number of extensions: 6834
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 2
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)